STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013451tRNA methyltransferase 2 homolog B. (434 aa)    
Predicted Functional Partners:
ENSGMOP00000012179
tRNA methyltransferase 61A.
   
  
 0.868
ENSGMOP00000012372
Transducin (beta)-like 3.
   
    0.840
ENSGMOP00000000565
BOP1 ribosomal biogenesis factor.
   
    0.834
ENSGMOP00000005077
Centrosomal protein 152.
   
    0.834
ENSGMOP00000002662
Ribosome production factor 2 homolog.
   
  
 0.804
ENSGMOP00000012576
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54.
  
    0.795
ENSGMOP00000014062
TSEN54 tRNA splicing endonuclease subunit.
   
    0.780
ENSGMOP00000002981
N-acetyltransferase 10.
  
    0.779
ENSGMOP00000003643
Peter pan homolog.
   
    0.764
ENSGMOP00000012350
annotation not available
   
    0.763
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.