STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013570Lumican. (328 aa)    
Predicted Functional Partners:
ENSGMOP00000020797
Secreted protein, acidic, cysteine-rich (osteonectin).
   
  
 0.945
ENSGMOP00000013569
Decorin.
  
  
0.941
ENSGMOP00000021117
Fas ligand (TNF superfamily, member 6).
    
 0.909
ENSGMOP00000009451
Transforming growth factor, beta 5.
    
 0.870
ENSGMOP00000018664
Transforming growth factor, beta 2.
    
 0.870
ENSGMOP00000013393
SPARC-like 1.
   
  
 0.869
ENSGMOP00000018452
MDM2 proto-oncogene.
   
 
  0.842
ENSGMOP00000017586
MDM4 regulator of p53.
   
 
  0.826
ENSGMOP00000020706
Aggrecan b.
    
 0.823
ENSGMOP00000004409
Matrilin 3b.
   
 0.817
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.