STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013606Bardet-Biedl syndrome 7. (714 aa)    
Predicted Functional Partners:
ENSGMOP00000001463
Bardet-Biedl syndrome 2.
  
 0.996
ENSGMOP00000009062
Bardet-Biedl syndrome 4.
    
 0.994
ENSGMOP00000010359
annotation not available
    
 0.994
ENSGMOP00000016285
Bardet-Biedl syndrome 1.
   
 0.989
ttc8
Tetratricopeptide repeat domain 8.
  
 0.988
ENSGMOP00000007118
Leucine zipper transcription factor-like 1.
    
 0.958
bbs5
Bardet-Biedl syndrome 5.
   
 0.938
ENSGMOP00000000927
annotation not available
   
 0.937
ENSGMOP00000013688
Kinesin family member C3.
   
 0.937
ENSGMOP00000018138
Si:ch211-257p13.3.
   
 0.937
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.