STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013625annotation not available (88 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.819
ENSGMOP00000017627
annotation not available
    
 0.819
ENSGMOP00000002700
Myosin IIIB.
   
 0.773
ENSGMOP00000016808
Myosin IIIA.
   
 0.773
ENSGMOP00000006041
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 0.662
ENSGMOP00000010751
CCM2 scaffold protein.
    
 
 0.634
ENSGMOP00000020711
Xeroderma pigmentosum, complementation group C.
    
 0.627
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.624
ENSGMOP00000010713
NME/NM23 family member 8.
   
 
 0.609
ENSGMOP00000001536
Doublecortin-like kinase 1b.
   
 0.604
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.