STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013710Si:ch211-193k19.1. (746 aa)    
Predicted Functional Partners:
ENSGMOP00000003758
Ubiquilin 4.
    
  0.665
ENSGMOP00000002044
Adaptor related protein complex 2 subunit mu 1b.
   
 0.620
ENSGMOP00000008405
annotation not available
   
 0.620
ENSGMOP00000004906
Synaptotagmin XIb.
   
  0.610
ENSGMOP00000006320
Synaptotagmin IV.
   
  0.610
ENSGMOP00000007772
ArfGAP with FG repeats 1a.
    
  0.574
ENSGMOP00000019066
ArfGAP with FG repeats 1b.
    
  0.574
ENSGMOP00000000023
annotation not available
    
  0.557
ENSGMOP00000004832
Adaptor related protein complex 2 subunit alpha 1.
    
  0.557
ENSGMOP00000019425
annotation not available
    
  0.548
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.