STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013718annotation not available (226 aa)    
Predicted Functional Partners:
ENSGMOP00000000769
Sorbin and SH3 domain containing 2a.
    
 0.812
ENSGMOP00000006563
Sorbin and SH3 domain containing 3.
    
 0.749
ENSGMOP00000006633
Sorbin and SH3 domain containing 1.
    
 0.749
LOC115560808
Flotillin-2.
  
  
 
0.659
ENSGMOP00000015139
Flotillin 2a.
  
  
 
0.659
cav1
Caveolin 1.
    
 0.605
ENSGMOP00000008441
Caveolin 3.
    
 0.603
ENSGMOP00000012192
Caveolin 2.
    
 0.593
ENSGMOP00000021250
annotation not available
    
  0.587
ENSGMOP00000001776
SH3 domain containing 19.
    
  0.579
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.