STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013725Taxilin beta b. (532 aa)    
Predicted Functional Partners:
ENSGMOP00000003702
Syntaxin 4.
    
 0.679
ENSGMOP00000000586
Syntaxin 1A (brain).
    
 0.648
ENSGMOP00000007217
Syntaxin 2b.
    
 0.648
LOC115533324
syntaxin-1B.
    
 0.648
ENSGMOP00000015273
Syntaxin 3A.
    
 0.648
ENSGMOP00000009576
Syntaxin 11b, tandem duplicate 2.
    
 0.606
ENSGMOP00000009821
annotation not available
    
 0.606
ENSGMOP00000000794
annotation not available
    
 0.602
STX19
Syntaxin 19.
    
 0.587
ENSGMOP00000013709
alpha-L-fucosidase 2.
      
 0.437
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.