STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013760Plastin 1 (I isoform). (529 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.812
ENSGMOP00000011600
Actin related protein 2/3 complex, subunit 5B.
    
 
 0.679
LOC115534421
Actin, alpha cardiac-like.
   
 
 0.660
ENSGMOP00000001711
annotation not available
   
 
 0.660
ACTA1
Actin, alpha skeletal muscle-like.
   
 
 0.660
LOC115540271
Actin, cytoplasmic 1-like.
   
 
 0.660
ENSGMOP00000010348
Actin, beta 2.
   
 
 0.660
LOC115544317
Actin, alpha cardiac.
   
 
 0.660
LOC115558390
Actin, alpha skeletal muscle.
   
 
 0.660
ENSGMOP00000018798
Actin related protein 1, centractin.
   
 
 0.660
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.