STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013773annotation not available (381 aa)    
Predicted Functional Partners:
ENSGMOP00000011011
Radical S-adenosyl methionine domain containing 2.
   
  
 0.860
ENSGMOP00000015866
Interferon induced with helicase C domain 1.
   
 
 0.805
ENSGMOP00000009833
Interferon-induced protein 35.
   
  
 0.659
HABP2
Hyaluronan binding protein 2.
    
  0.656
HGFAC
HGF activator.
    
  0.656
ENSGMOP00000003208
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.650
ENSGMOP00000003511
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.650
ENSGMOP00000009201
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.650
ENSGMOP00000013432
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.650
ENSGMOP00000007454
annotation not available
   
  
 0.647
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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