STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013775REX4 homolog, 3'-5' exonuclease. (331 aa)    
Predicted Functional Partners:
ENSGMOP00000019637
WD repeat domain 18.
  
  0.942
ENSGMOP00000003643
Peter pan homolog.
   
   0.910
ENSGMOP00000019129
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55.
  
 0.909
ENSGMOP00000016253
poly(A) specific ribonuclease subunit PAN3.
    
 0.894
ENSGMOP00000012493
RNA binding motif protein 34.
   
 0.892
pcna
Proliferating cell nuclear antigen.
  
 0.890
ENSGMOP00000007589
annotation not available
  
 0.880
ENSGMOP00000008090
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49.
  
 0.865
ENSGMOP00000011012
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47.
  
 0.865
ENSGMOP00000017546
Zinc finger, CCHC domain containing 9.
   
   0.860
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.