STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013812Diaphanous-related formin 3. (1036 aa)    
Predicted Functional Partners:
LOC115540915
Cell division control protein 42 homolog.
   
 0.932
CDC42
Cell division cycle 42.
   
 0.932
LOC115553989
Cell division control protein 42 homolog.
   
 0.927
ENSGMOP00000009811
annotation not available
    
 0.870
ENSGMOP00000017891
BAR/IMD domain containing adaptor protein 2a.
    
 0.870
ENSGMOP00000005768
Zgc:158689.
    
 0.862
ENSGMOP00000010542
Ras homolog family member F.
   
 0.780
DIAPH1
Diaphanous related formin 1.
  
  
 
0.780
PFN2
Profilin 2.
    
 0.753
ENSGMOP00000006216
Profilin 2.
    
 0.753
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.