STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013818Stromal antigen 1a. (1264 aa)    
Predicted Functional Partners:
ENSGMOP00000003547
RAD21 cohesin complex component a.
   
 0.984
ENSGMOP00000015817
Structural maintenance of chromosomes 3.
   
 0.981
ENSGMOP00000003692
Structural maintenance of chromosomes 1B.
   
 0.979
smc1a
Structural maintenance of chromosomes 1A.
   
 0.979
ENSGMOP00000001129
PDS5 cohesin associated factor A.
   
 0.926
ENSGMOP00000005521
PDS5 cohesin associated factor B.
   
 0.926
NIPBL
NIPBL cohesin loading factor.
   
 0.919
ENSGMOP00000014718
annotation not available
   
 0.919
ENSGMOP00000000655
Extra spindle pole bodies like 1, separase.
    
 0.905
ENSGMOP00000014304
Si:dkey-119f1.1.
   
 0.887
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.