STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013822PCI domain containing 2. (137 aa)    
Predicted Functional Partners:
ENSGMOP00000005314
Leukocyte receptor cluster (LRC) member 8.
   
 
 0.945
ENSGMOP00000014555
SEM1 26S proteasome complex subunit.
    
 
 0.945
ENSGMOP00000013834
PCI domain containing 2.
 
     0.936
ENSGMOP00000013511
Minichromosome maintenance complex component 3 associated protein.
   
 
 0.904
ENSGMOP00000014873
ENY2 transcription and export complex 2 subunit.
    
 
 0.896
ENSGMOP00000016121
Si:zfos-452g4.1.
   
 
 0.877
ENSGMOP00000010444
annotation not available
    
 
 0.778
ENSGMOP00000006739
Centrin, EF-hand protein, 2.
    
 
 0.768
ENSGMOP00000018230
annotation not available
    
 
 0.753
ENSGMOP00000005622
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.704
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.