STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013839propionyl-CoA carboxylase subunit beta. (557 aa)    
Predicted Functional Partners:
ENSGMOP00000000171
propionyl-CoA carboxylase subunit alpha.
 
 0.998
ENSGMOP00000009124
methylcrotonoyl-CoA carboxylase 1 (alpha).
 
 0.998
ENSGMOP00000015712
Pyruvate carboxylase b.
 
 0.987
ENSGMOP00000001525
Negative elongation factor complex member C/D.
  
 0.970
ENSGMOP00000013784
Methylmalonyl CoA epimerase.
 
 
 0.947
ENSGMOP00000010080
annotation not available
  
 0.930
ENSGMOP00000014175
Dihydrolipoamide branched chain transacylase E2.
  
 
 0.930
ENSGMOP00000012730
Sterol carrier protein 2a.
  
 
 0.920
ENSGMOP00000019175
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.920
ENSGMOP00000011621
acetyl-CoA acyltransferase 1.
  
 0.916
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.