STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013897Tubulin tyrosine ligase-like family, member 12. (529 aa)    
Predicted Functional Partners:
ENSGMOP00000020982
Polysaccharide biosynthesis domain containing 1.
    
   0.797
ENSGMOP00000017050
EEF1A lysine methyltransferase 1.
    
   0.658
ENSGMOP00000012643
annotation not available
 
   
  0.641
ENSGMOP00000017130
Aldehyde dehydrogenase 6 family, member A1.
 
   
  0.641
LOC115559686
Elongation factor 1-alpha, somatic form.
    
   0.594
ENSGMOP00000006489
Si:dkey-37o8.1.
    
   0.594
ENSGMOP00000010628
annotation not available
    
   0.594
LOC115536142
Elongation factor 1-alpha.
    
   0.594
LOC115536143
Elongation factor 1-alpha-like.
    
   0.594
GSPT1
G1 to S phase transition 1.
    
   0.594
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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