STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013930annotation not available (391 aa)    
Predicted Functional Partners:
ENSGMOP00000004133
annotation not available
    
 0.805
ENSGMOP00000016265
Protein tyrosine phosphatase non-receptor type 11b.
   
  0.560
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
  0.560
ENSGMOP00000019068
Protein tyrosine phosphatase non-receptor type 11a.
   
  0.560
COLEC12
Collectin subfamily member 12.
    
  0.548
ENSGMOP00000007583
Collectin sub-family member 12.
    
  0.548
ENSGMOP00000002610
annotation not available
    
  0.545
ENSGMOP00000021216
annotation not available
    
  0.545
ENSGMOP00000021291
annotation not available
    
  0.545
ENSGMOP00000021485
annotation not available
    
  0.545
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.