STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000013988SET binding factor 1. (1827 aa)    
Predicted Functional Partners:
ENSGMOP00000005047
Myotubularin 1.
   
0.808
ENSGMOP00000017357
Myotubularin related protein 2.
   
0.808
ENSGMOP00000020226
Myotubularin related protein 1a.
   
0.808
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.779
ENSGMOP00000010831
RAB21, member RAS oncogene family.
    
 0.775
MTMR4
Myotubularin related protein 4.
   
0.765
ENSGMOP00000018893
Myotubularin related protein 3.
   
0.765
ENSGMOP00000019022
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
     
 0.690
ENSGMOP00000015713
Divergent protein kinase domain 2Ab.
     
 0.651
ENSGMOP00000006058
annotation not available
     
 0.620
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.