STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014128Zinc finger, MYND-type containing 11. (550 aa)    
Predicted Functional Partners:
ENSGMOP00000004778
Integrator complex subunit 3.
    
   0.797
ENSGMOP00000005297
Integrator complex subunit 1.
    
   0.797
ENSGMOP00000007460
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.599
ENSGMOP00000009901
Integrator complex subunit 6.
    
   0.570
ENSGMOP00000000234
DEAF1 transcription factor.
   
  
 0.521
ENSGMOP00000018314
annotation not available
    
 
 0.511
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.497
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 
 0.468
ENSGMOP00000020579
Solute carrier family 50 member 1.
      
 0.467
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.463
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.