STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014142ilvB (bacterial acetolactate synthase)-like. (624 aa)    
Predicted Functional Partners:
ENSGMOP00000007097
annotation not available
  
 0.919
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.919
ENSGMOP00000009851
Branched chain amino-acid transaminase 2, mitochondrial.
  
 0.919
ENSGMOP00000017029
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.919
ENSGMOP00000015712
Pyruvate carboxylase b.
     
 0.905
cs
Citrate synthase.
    
 0.903
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.900
ENSGMOP00000005831
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
  
 
 0.894
ENSGMOP00000020423
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.894
hddc3
HD domain containing 3.
  
 
 0.883
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.