STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014149Cyclin-dependent kinase 2 associated protein 2. (111 aa)    
Predicted Functional Partners:
ENSGMOP00000000288
annotation not available
   
 
 0.689
ENSGMOP00000009568
methyl-CpG binding domain protein 3a.
   
 
 0.689
ENSGMOP00000013078
annotation not available
   
 
 0.689
ENSGMOP00000005214
Retinoblastoma binding protein 4, like.
   
 
 0.650
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.650
ENSGMOP00000012523
annotation not available
   
 
 0.650
ENSGMOP00000007015
Metastasis associated 1 family, member 3.
    
 
 0.579
ENSGMOP00000007882
Metastasis associated 1 family, member 2.
    
 
 0.579
ENSGMOP00000020085
Metastasis associated 1.
    
 
 0.579
ENSGMOP00000007950
GATA zinc finger domain containing 2Ab.
    
 
 0.565
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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