STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014186annotation not available (212 aa)    
Predicted Functional Partners:
ENSGMOP00000007291
EF-hand calcium binding domain 1.
   
 
 0.655
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 
 0.627
ENSGMOP00000004739
Eukaryotic translation initiation factor 1A X-linked b.
   
   0.600
ENSGMOP00000001029
G patch domain containing 3.
    
 
 0.586
RYR2
Ryanodine receptor 2.
    
 0.585
ENSGMOP00000016225
Ryanodine receptor 3.
    
 0.585
RYR3
Ryanodine receptor 3.
    
 0.585
ENSGMOP00000020319
Ryanodine receptor 2b (cardiac).
    
 0.585
ENSGMOP00000020830
annotation not available
    
 0.585
ENSGMOP00000020859
Ryanodine receptor 1b (skeletal).
    
 0.585
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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