STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014206Si:ch73-139e5.4. (1000 aa)    
Predicted Functional Partners:
ENSGMOP00000014602
annotation not available
   
 0.901
ENSGMOP00000015966
Phosphodiesterase 6C, cGMP-specific, cone, alpha prime.
   
 0.901
ENSGMOP00000017728
Phosphodiesterase 6B, cGMP-specific, rod, beta.
   
 0.901
ENSGMOP00000012680
Phosphodiesterase 9A like.
   
 0.890
ENSGMOP00000019507
Phosphodiesterase 9A.
   
 0.888
ENSGMOP00000009709
Phosphodiesterase 3B.
   
 0.885
ENSGMOP00000005330
annotation not available
     
 0.876
ENSGMOP00000005370
annotation not available
     
 0.876
PDE1C
Phosphodiesterase 1C.
     
 0.876
ENSGMOP00000001673
annotation not available
     
 0.875
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.