STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014226ATP-binding cassette, sub-family F (GCN20), member 1. (752 aa)    
Predicted Functional Partners:
ENSGMOP00000008696
Mitochondrial ribosomal protein L20.
  
 
 0.910
ENSGMOP00000000531
Mitochondrial ribosomal protein L27.
  
 
 0.896
rps18
Ribosomal protein S18.
  
 
 0.893
rpl35
Ribosomal protein L35.
  
 
 0.889
ENSGMOP00000015972
Ribosomal protein L23a.
  
 
 0.889
ENSGMOP00000001035
Ribosomal protein L9.
  
 
 0.886
ENSGMOP00000012827
Ribosomal protein L11.
  
 
 0.885
ENSGMOP00000011725
annotation not available
  
   0.881
ENSGMOP00000002085
Mitochondrial ribosomal protein L33.
  
 
 0.878
rps3
Ribosomal protein S3.
  
   0.875
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.