STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014227Zinc finger, FYVE domain containing 9a. (737 aa)    
Predicted Functional Partners:
ENSGMOP00000013286
annotation not available
 
   
  0.961
ENSGMOP00000001376
annotation not available
   
 0.913
smad2
SMAD family member 2.
   
 0.913
LOC115551191
Mothers against decapentaplegic homolog 3-like.
   
 0.913
ENSGMOP00000009354
annotation not available
  
  
 
0.829
ENSGMOP00000019636
annotation not available
  
  
 
0.828
ENSGMOP00000019649
annotation not available
  
  
 
0.828
ENSGMOP00000000295
annotation not available
    
 0.707
SMAD4
SMAD family member 4.
    
 0.707
ENSGMOP00000014927
SMAD family member 4b.
    
 0.707
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.