STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014270Ankyrin repeat and SOCS box containing 14a. (426 aa)    
Predicted Functional Partners:
ENSGMOP00000010257
Fleer.
    
 0.655
rps3
Ribosomal protein S3.
    
 0.638
ift81
Intraflagellar transport 81.
    
 0.632
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
    
 0.627
ENSGMOP00000004325
NEDD8 ubiquitin like modifier, like.
    
  0.625
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
   
 0.625
ENSGMOP00000001087
COMM domain containing 8.
   
  0.618
ENSGMOP00000011181
UBX domain protein 7.
    
 0.605
ENSGMOP00000011994
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.605
ENSGMOP00000021153
Ankyrin repeat domain 46b.
  
 
  0.604
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]