STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDZMultiple PDZ domain crumbs cell polarity complex component. (1799 aa)    
Predicted Functional Partners:
ENSGMOP00000003444
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5).
    
 0.927
MPP5
Membrane palmitoylated protein 5.
    
 0.927
ENSGMOP00000019698
Angiomotin.
    
 0.882
ENSGMOP00000008105
Tight junction protein 3.
    
 0.853
ENSGMOP00000019958
annotation not available
    
0.848
ENSGMOP00000014303
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
   
 0.817
PLCB4
Phospholipase C beta 4.
   
  0.810
ENSGMOP00000013407
Rho/rac guanine nucleotide exchange factor (GEF) 18a.
   
  0.807
ENSGMOP00000003952
Wu:fi36a10.
    
0.734
ENSGMOP00000008314
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.734
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.