STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014366Copine III. (556 aa)    
Predicted Functional Partners:
ENSGMOP00000018081
Ribonuclease H2, subunit B.
   
 
 0.648
ENSGMOP00000006010
Ribonuclease H2, subunit A.
   
 
 0.606
ENSGMOP00000019022
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 0.568
ENSGMOP00000018651
Myocardin related transcription factor Ab.
     
 0.451
ENSGMOP00000019167
annotation not available
     
 0.451
ENSGMOP00000005447
annotation not available
     
 0.442
ENSGMOP00000009126
annotation not available
     
 0.442
ENSGMOP00000014572
SAC1 like phosphatidylinositide phosphatase b.
     
 0.441
ENSGMOP00000020363
annotation not available
     
 0.441
ENSGMOP00000000347
Acetylserotonin O-methyltransferase.
     
 0.428
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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