STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014422Cyclin B1 interacting protein 1. (233 aa)    
Predicted Functional Partners:
man2c1
Mannosidase alpha class 2C member 1.
     
 0.848
ENSGMOP00000011415
Mannosidase, alpha, class 2A, member 2.
     
 0.794
ENSGMOP00000003352
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).
     
 0.766
ENSGMOP00000009875
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a.
   
 
 0.690
ENSGMOP00000020403
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b.
   
 
 0.690
ENSGMOP00000019479
Histocompatibility (minor) 13.
      
 0.523
sf3a3
Splicing factor 3a subunit 3.
      
 0.518
ENSGMOP00000014898
Glucuronidase, beta.
   
 
 0.517
ENSGMOP00000013939
Mannosidase, beta A, lysosomal.
   
 
 0.515
ENSGMOP00000008486
O-sialoglycoprotein endopeptidase.
      
 0.509
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.