STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014441Ankyrin repeat domain 1a (cardiac muscle). (290 aa)    
Predicted Functional Partners:
ENSGMOP00000003241
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
    
 0.652
rps3
Ribosomal protein S3.
    
 0.638
ift81
Intraflagellar transport 81.
    
 0.632
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
   
 0.625
ENSGMOP00000011994
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.616
ENSGMOP00000011181
UBX domain protein 7.
    
 0.605
ENSGMOP00000017000
Intraflagellar transport 88 homolog.
   
 0.603
ENSGMOP00000007297
F-box and WD repeat domain containing 11a.
    
 0.602
ENSGMOP00000015684
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.599
ENSGMOP00000018026
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.599
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.