STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014484Cathepsin Ba. (330 aa)    
Predicted Functional Partners:
ENSGMOP00000013261
Ribosomal protein S14.
   
 0.859
ENSGMOP00000018771
Cathepsin H.
  
0.853
ENSGMOP00000003585
BCL2 apoptosis regulator b.
   
 
 0.850
ENSGMOP00000002896
Baculoviral IAP repeat containing 5a.
     
 0.849
ENSGMOP00000007338
annotation not available
     
 0.849
ENSGMOP00000021303
BCL2 like 1.
     
 0.846
ENSGMOP00000003345
X-linked inhibitor of apoptosis.
     
 0.845
ENSGMOP00000016010
Baculoviral IAP repeat containing 2.
     
 0.845
ENSGMOP00000004761
Cathepsin C.
   
0.831
ENSGMOP00000019328
annotation not available
     
 0.831
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.