STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014528RAD50 homolog, double strand break repair protein. (1226 aa)    
Predicted Functional Partners:
ENSGMOP00000013757
MRE11 homolog A, double strand break repair nuclease.
  
 0.999
ENSGMOP00000008600
Nibrin.
   
 0.997
ENSGMOP00000000890
annotation not available
   
 0.991
ENSGMOP00000009537
ATM serine/threonine kinase.
   
 0.991
ENSGMOP00000000789
annotation not available
    
 0.985
ENSGMOP00000003122
annotation not available
   
 0.982
ENSGMOP00000013739
annotation not available
    
 0.978
ENSGMOP00000014473
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 0.974
ENSGMOP00000020444
annotation not available
    
 0.972
ENSGMOP00000013790
ATR serine/threonine kinase.
   
 0.970
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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