STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc45Cell division cycle 45. (568 aa)    
Predicted Functional Partners:
ENSGMOP00000002771
Minichromosome maintenance complex component 4.
   
 0.999
gins2
GINS complex subunit 2.
   
 0.999
ENSGMOP00000004297
Minichromosome maintenance complex component 6.
   
 0.999
ENSGMOP00000009879
Minichromosome maintenance complex component 5.
   
 0.999
ENSGMOP00000012492
Minichromosome maintenance complex component 2.
   
 0.999
ENSGMOP00000020169
Minichromosome maintenance complex component 7.
   
 0.999
ENSGMOP00000009854
Polymerase (DNA directed), epsilon 2.
   
 0.998
ENSGMOP00000009888
Minichromosome maintenance 10 replication initiation factor.
   
 0.998
ENSGMOP00000018711
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.998
ENSGMOP00000000890
annotation not available
   
 
 0.997
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.