STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014547Ring finger and WD repeat domain 3. (413 aa)    
Predicted Functional Partners:
rpa3
Replication protein A3.
    
 
 0.968
ENSGMOP00000011113
Replication protein A1.
   
 
 0.957
ENSGMOP00000010089
Primase and polymerase (DNA-directed).
    
   0.947
ENSGMOP00000005745
Methionine sulfoxide reductase B1b.
   
 
 0.840
ENSGMOP00000002363
Beta-2-microglobulin, like.
    
 
 0.805
ENSGMOP00000016869
Replication protein A2.
    
 
 0.805
ENSGMOP00000010728
annotation not available
    
 
 0.687
ENSGMOP00000017768
Transient receptor potential cation channel, subfamily M, member 6.
     
 0.654
ENSGMOP00000018851
Transient receptor potential cation channel, subfamily M, member 7.
     
 0.654
ENSGMOP00000001842
STN1 subunit of CST complex.
    
 
 0.641
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.