STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1336 aa)    
Predicted Functional Partners:
rgp1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.996
cog8
Component of oligomeric golgi complex 8.
   
 0.913
ENSGMOP00000003675
annotation not available
    
 0.890
LOC115552351
Ras-related protein Rab-6A-like.
    
 0.890
ENSGMOP00000010117
RAB6B, member RAS oncogene family b.
    
 0.890
ENSGMOP00000020538
annotation not available
    
 0.890
ENSGMOP00000007601
RAB34, member RAS oncogene family b.
    
 0.871
ENSGMOP00000015485
RAB36, member RAS oncogene family.
    
 0.871
rab34
RAB34, member RAS oncogene family.
    
 0.871
ENSGMOP00000000907
RAB33B, member RAS oncogene family a.
    
 0.869
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.