STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014569Forkhead box C1a. (470 aa)    
Predicted Functional Partners:
ENSGMOP00000002141
annotation not available
     
 0.765
ENSGMOP00000018356
Serum/glucocorticoid regulated kinase family member 3.
    
 0.699
ENSGMOP00000006182
Transmembrane p24 trafficking protein 7.
    
  0.561
ENSGMOP00000018830
Transmembrane p24 trafficking protein 3.
    
  0.561
LOC115535580
Homeobox protein Hox-A5.
    
 0.558
ENSGMOP00000006110
annotation not available
    
 0.546
ENSGMOP00000018046
Sirtuin 5.
    
 0.541
ENSGMOP00000019729
annotation not available
    
 0.541
ENSGMOP00000021953
annotation not available
    
 0.521
ENSGMOP00000002461
Forkhead box L1.
   
0.519
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.