STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014605annotation not available (307 aa)    
Predicted Functional Partners:
ENSGMOP00000016337
Superoxide dismutase 1, soluble.
   
 0.589
ENSGMOP00000011372
Si:dkey-21a6.5.
    
  0.587
ENSGMOP00000016804
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.587
ENSGMOP00000005020
annotation not available
    
  0.523
ENSGMOP00000008071
annotation not available
    
  0.523
ENSGMOP00000008308
annotation not available
    
  0.523
ENSGMOP00000011619
Trio Rho guanine nucleotide exchange factor a.
    
  0.523
ENSGMOP00000017172
annotation not available
    
  0.523
WDR1
WD repeat domain 1.
   
 
  0.503
ENSGMOP00000005470
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
  0.480
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.