STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014621LIM domain binding 2a. (296 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2.
    
 0.941
ENSGMOP00000006228
T-cell acute lymphocytic leukemia 1.
    
 0.910
ENSGMOP00000001415
LIM domain only 1.
    
 0.890
ENSGMOP00000015566
LIM domain only 3.
    
 0.890
ENSGMOP00000013845
LIM homeobox 2b.
    
 0.774
ENSGMOP00000016700
annotation not available
    
 0.774
ENSGMOP00000019973
LIM homeobox 9.
    
 0.774
ENSGMOP00000019351
GATA binding protein 1a.
    
 0.763
ENSGMOP00000001027
ISL LIM homeobox 1.
    
 0.762
LOC115551219
Insulin gene enhancer protein isl-2a-like.
    
 0.762
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.