STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014628Si:ch211-236k19.2. (278 aa)    
Predicted Functional Partners:
ENSGMOP00000004712
annotation not available
    
 0.661
ENSGMOP00000014621
LIM domain binding 2a.
    
 0.661
ENSGMOP00000021000
LIM-domain binding 1b.
    
 0.661
ENSGMOP00000011580
GATA binding protein 4.
   
 0.620
ENSGMOP00000008667
Folliculogenesis specific bHLH transcription factor.
   
 0.584
ENSGMOP00000001614
annotation not available
    
 0.567
ENSGMOP00000009498
Serum response factor b.
    
 0.567
ENSGMOP00000002397
Achaete-scute family bHLH transcription factor 1a.
    
 0.530
ENSGMOP00000004039
GATA binding protein 5.
   
 0.514
ENSGMOP00000012162
GATA binding protein 6.
   
 0.514
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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