STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60. (133 aa)    
Predicted Functional Partners:
ENSGMOP00000000474
Trans-golgi network vesicle protein 23 homolog B (S. cerevisiae).
      
 0.481
ENSGMOP00000000809
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
     
 0.455
ENSGMOP00000003534
annotation not available
     
 0.455
ENSGMOP00000010892
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
     
 0.455
ENSGMOP00000012642
annotation not available
     
 0.455
ENSGMOP00000017031
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
     
 0.455
ENSGMOP00000016198
Tpd52 like 2b.
      
 0.402
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.