STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014693Pinin, desmosome associated protein. (240 aa)    
Predicted Functional Partners:
ENSGMOP00000001569
RNA binding protein S1, serine-rich domain.
   
 0.995
ENSGMOP00000016031
Apoptotic chromatin condensation inducer 1a.
   
 0.975
sap18
Sin3A associated protein 18.
    
 0.962
ENSGMOP00000006352
annotation not available
    
 0.962
ENSGMOP00000001644
Eukaryotic translation initiation factor 4A3.
    
 0.951
ENSGMOP00000007186
pre-mRNA processing factor 4Bb.
   
 0.947
magoh
Mago homolog, exon junction complex subunit.
   
 0.929
PABPN1L
PABPN1 like, cytoplasmic.
   
 0.902
pabpn1
poly(A) binding protein nuclear 1.
   
 0.902
ENSGMOP00000020560
Serine/arginine repetitive matrix 1.
   
 0.902
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.