STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014741LON peptidase N-terminal domain and ring finger 1. (337 aa)    
Predicted Functional Partners:
ENSGMOP00000012733
Ribosomal protein S27a.
   
  0.831
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.810
ENSGMOP00000005929
PAX interacting (with transcription-activation domain) protein 1.
   
 0.733
ENSGMOP00000004009
annotation not available
    
 0.714
ENSGMOP00000004024
annotation not available
    
 0.714
ENSGMOP00000013739
annotation not available
    
 0.713
ENSGMOP00000020444
annotation not available
    
 0.709
ube2n
Ubiquitin conjugating enzyme E2 N.
    
 0.708
ENSGMOP00000011049
annotation not available
    
 0.708
ube2v2
Ubiquitin conjugating enzyme E2 V2.
     
 0.699
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.