STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHORhodopsin. (352 aa)    
Predicted Functional Partners:
ENSGMOP00000001117
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.956
gnat1
G protein subunit alpha transducin 1.
   
 0.956
LOC115535552
Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.
   
 0.945
ENSGMOP00000009008
annotation not available
    
 0.935
LOC115557603
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
 0.935
LOC115532807
Rhodopsin kinase-like.
   
 0.918
ENSGMOP00000006271
G protein-coupled receptor kinase 1 b.
   
 0.917
ENSGMOP00000002286
annotation not available
   
 0.915
ENSGMOP00000004931
S-antigen; retina and pineal gland (arrestin) a.
   
 0.915
GRK7
G protein-coupled receptor kinase 7.
   
 0.906
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.