STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014745Nucleoporin 160. (1388 aa)    
Predicted Functional Partners:
ENSGMOP00000007553
RAN binding protein 2.
   
 0.999
ENSGMOP00000018338
Nucleoporin 107.
   
 0.999
ENSGMOP00000019009
Nucleoporin 43.
   
 0.999
ENSGMOP00000001571
Nucleoporin 98.
   
 0.998
nup85
Nucleoporin 85.
   
 0.998
ENSGMOP00000017796
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.998
ENSGMOP00000005075
Nucleoporin 205.
   
 0.997
ENSGMOP00000001263
Nucleoporin 37.
    
 0.994
ENSGMOP00000014790
Nucleoporin 155.
   
 0.991
ENSGMOP00000011129
AT hook containing transcription factor 1.
   
 0.989
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.