STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxa3Homeobox A3. (422 aa)    
Predicted Functional Partners:
LOC115535580
Homeobox protein Hox-A5.
   
  
0.797
ENSGMOP00000010553
annotation not available
   
  
0.690
ENSGMOP00000002449
Forkhead box N1.
    
 0.590
ENSGMOP00000014810
annotation not available
   
 
0.583
ENSGMOP00000007733
pre-B-cell leukemia homeobox 2.
    
 0.563
ENSGMOP00000006833
annotation not available
    
 0.556
ENSGMOP00000008163
pre-B-cell leukemia homeobox 1b.
    
 0.556
ENSGMOP00000009955
pre-B-cell leukemia transcription factor 4.
    
 0.556
ENSGMOP00000010893
pre-B-cell leukemia homeobox 1a.
    
 0.556
LOC115539909
pre-B-cell leukemia transcription factor 1-like.
    
 0.556
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.