STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014786Intraflagellar transport 140 homolog (Chlamydomonas). (1356 aa)    
Predicted Functional Partners:
ENSGMOP00000000967
WD repeat domain 19.
    
 0.998
ENSGMOP00000014755
annotation not available
   
 0.998
ENSGMOP00000004388
WD repeat domain 35.
    
 0.995
ENSGMOP00000015592
Tetratricopeptide repeat domain 21B.
  
 0.988
IFT43
Intraflagellar transport 43.
    
 0.987
ENSGMOP00000010397
annotation not available
   
 0.930
ift20
Intraflagellar transport 20.
    
 0.881
ift81
Intraflagellar transport 81.
    
 0.866
ENSGMOP00000016397
Intraflagellar transport 172.
   
 0.864
ENSGMOP00000014884
Tetratricopeptide repeat domain 26.
   
 
 0.831
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.