STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014855Carbonic anhydrase VIII. (287 aa)    
Predicted Functional Partners:
ENSGMOP00000002662
Ribosome production factor 2 homolog.
   
 
 0.700
ENSGMOP00000012827
Ribosomal protein L11.
    
 
 0.625
RPL5
Ribosomal protein L5.
    
 
 0.597
RPL5-2
Ribosomal protein L5.
    
 
 0.597
ENSGMOP00000003643
Peter pan homolog.
   
    0.592
ENSGMOP00000005268
Glutamate-rich WD repeat containing 1.
   
  
 0.556
ENSGMOP00000002543
annotation not available
  
 
 
0.546
ENSGMOP00000001794
WD repeat domain 43.
   
    0.540
ENSGMOP00000017264
GTP binding protein 4.
   
    0.529
ENSGMOP00000007222
annotation not available
  
 
 
0.526
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.