STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014870Proline rich Gla (G-carboxyglutamic acid) 1. (205 aa)    
Predicted Functional Partners:
ENSGMOP00000015634
Gamma-glutamyl carboxylase.
    
 
 0.567
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.504
ENSGMOP00000020145
Tumor necrosis factor, alpha-induced protein 3.
  
     0.467
ENSGMOP00000001423
CKLF-like MARVEL transmembrane domain containing 3.
      
 0.452
perp
P53 apoptosis effector related to PMP22.
  
   
 0.443
ENSGMOP00000004526
Fatty acid 2-hydroxylase.
      
 0.418
ENSGMOP00000009701
annotation not available
  
     0.411
ENSGMOP00000020287
annotation not available
  
     0.405
ENSGMOP00000004433
annotation not available
  
     0.401
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.