STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014904Solute carrier family 8 member 3. (927 aa)    
Predicted Functional Partners:
ENSGMOP00000006580
Fraser extracellular matrix complex subunit 1.
   
0.857
LOC115548285
cAMP-dependent protein kinase catalytic subunit beta.
   
 
  0.826
LOC115530003
cAMP-dependent protein kinase catalytic subunit alpha.
   
 
  0.826
ENSGMOP00000011484
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
   
 
  0.826
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
   
 
  0.826
ENSGMOP00000004992
annotation not available
   
 
0.488
ENSGMOP00000005644
annotation not available
   
 
0.488
ENSGMOP00000009402
Solute carrier family 24 member 4b.
   
 
0.488
ENSGMOP00000014110
Solute carrier family 24 member 3.
   
 
0.488
ENSGMOP00000000977
Fras1 related extracellular matrix 1a.
   
  0.460
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.