STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014910Tax1 (human T-cell leukemia virus type I) binding protein 1a. (832 aa)    
Predicted Functional Partners:
ENSGMOP00000020145
Tumor necrosis factor, alpha-induced protein 3.
    
 0.916
ENSGMOP00000008364
GABA(A) receptor-associated protein b.
   
 0.905
gabarapl2
GABA type A receptor associated protein like 2.
   
 0.895
ENSGMOP00000008451
annotation not available
   
 0.895
LOC115554263
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
  0.890
ENSGMOP00000006041
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
  
  
 
0.847
ENSGMOP00000018256
TANK-binding kinase 1.
    
 0.838
ENSGMOP00000015833
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.831
ENSGMOP00000004007
5-azacytidine induced 2.
    
 
 0.825
ENSGMOP00000015220
TNF receptor-associated factor 6.
    
 0.816
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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