STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000014931Protein tyrosine phosphatase receptor type Ua. (1423 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.726
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.700
ENSGMOP00000003208
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.677
ENSGMOP00000003511
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
  0.677
ENSGMOP00000009201
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.677
ENSGMOP00000013432
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.677
ENSGMOP00000005177
annotation not available
    
  0.667
ENSGMOP00000010802
Colony stimulating factor 1 receptor, a.
    
  0.667
ENSGMOP00000011043
annotation not available
    
  0.667
ENSGMOP00000011315
annotation not available
    
  0.667
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.